edit_rmd_template_str returns a path to the altered Rmd template
edit_rmd_template_str(
rmd_str = NULL,
mapping = NULL,
rmd_output_path = NULL,
data_path = NULL,
multiple_dosing = FALSE,
pk_cmt = NULL,
pd_cmt = NULL,
dose_cmt = NULL,
steady_state_day = NULL,
time_between_doses = NULL,
author_name = NULL,
add_datetime = TRUE,
show_explanation = TRUE
)A character string containing the Rmd template raw characters
A list of column name mappings from the original (template) dataset column names to the corresponding columns in the new dataset
A custom output path for the generated Rmd file (This is typically left as `NULL` in order to maintain the hierarchical directory structure of `xgx_autoexplore_output`))
Path (as a string) to the dataset that is to be analyzed
if FALSE use single ascending dose template, if TRUE use multiple
An integer denoting the "compartment" containing the PK data. The "CMT" column will typically have these integers, where each row may contain either PK or PD data, potentially of different types (continuous, ordinal, etc.)
An integer denoting the "compartment" containing the PD data, of the desired type (continuous, ordinal, etc.). The "CMT" column will typically have these integers, where each row may contain either PK or PD data
CMT associated with dosing event
For multiple ascending dose, what day is steady state rich profile?
time interval between doses
The name of the author to be displayed on the template
Boolean indicating additon of a date stamp to the beginnning of the Rmd file
Boolean indicating if the additional explanations (text in between figures) are needed for the user.
A string of the new R markdown template