A suite of knockoffs functions and methods from existing R-packages and papers. Some of the R functions are simple wrapper functions, while others are novel implementations of recent methods.
Invoking the R-package in development mode
To invoke the R-package in development mode: please clone the repository, set it as working directory of your R session, and run devtools::load_all().
How to use knockofftools
In the vignette folder we provide various example use cases of the knockofftools.
References
Knockoff tools is introduced in Zimmermann et al. 2024).
Furthermore, details of the novel implemented methods can be found in the following papers:
- Sparse sequential knockoffs in Zimmermann et al. (2024)
- Sequential knockoffs in Kormaksson et al. (2021)
- Predictive knockoffs in Sechidis et al. (2021)
If you make use of any of these, please cite the papers above.
Code authors
- Matthias Kormaksson, matthias-1.kormaksson_ext@novartis.com
- Konstantinos (Kostas) Sechidis, kostas.sechidis@novartis.com
- Manuela Zimmermann, manuela.zimmermann@novartis.com